EGAF00005414374 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005414374
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2420110
Sequences flagged as poor quality	0
Sequence length	91
%GC	43

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8059	0.33300139249868804	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7210	0.2979203424637723	No Hit
GGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4447	0.18375197821586622	No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTT	3945	0.16300911942019164	No Hit
GTACGGGACTATCACCCTCTACGGTAGCACTTCCCAGAGCTTTCCGCTAA	3842	0.15875311452785204	No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCCGCGGTAC	3652	0.15090223171674017	No Hit
GTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3193	0.13193615166252773	No Hit
GTGGTATCAACGCAGAGTCGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTT	3064	0.12660581543814123	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA	3043	0.12573808628533412	No Hit
GTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGA	2776	0.11470552991392953	No Hit
ACGTAATAGCCTGCGATAAGCTTCGGGGAGGCGGCAAATATCCTGTGATC	2768	0.11437496642714587	No Hit
TCCCAGAGCTTTCCGCTAAAACACATATAACTTAATGGGCTGATCCCCGT	2687	0.11102801112346132	No Hit
GTACGGGGGAAGGCGCTTTGTGAAGTAGGCCTTATTTCTCTTGTCCTTTC	2621	0.10830086235749616	No Hit
CTACGGTAGCACTTCCCAGAGCTTTCCGCTAAAACACATATAACTTAATG	2584	0.10677200623112172	No Hit
GTTAGGGTACCGCGGCCGTTAAACATGTGTCACTGGGCAGGCGGTGCCTC	2520	0.10412749833685246	No Hit
GTACATGCTAAGACTTCACCAGTCAAAGCGAACTACTATACTCAATTGAT	2497	0.10317712831234944	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GACAGGT	950	38.939346	1
TGGTATC	6015	37.799564	2
GTATCAA	19145	37.51175	1
GTGGTAT	6355	35.728825	1
AACGCAG	21655	33.656937	6
TCAACGC	22965	31.755537	4
TATCAAC	23235	31.53285	2
CAACGCA	23420	31.156746	5
ATCAACG	23700	30.824509	3
CGCAGAG	24440	29.857655	8
ACGCAGA	24525	29.770271	7
GACAGGC	425	29.013632	1
GCTTGTA	1305	28.672474	1
GGTATCA	11020	28.089422	1
GTCGAGG	2695	27.754953	8
GCAGAGT	26625	27.487177	9
GCTTGTC	570	24.616829	1
GGCACCG	1450	24.327456	9
ATTAGAG	1585	24.131365	3
CAGAGTA	15260	24.063028	10-11