FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005414577

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005414577
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences131
Sequences flagged as poor quality0
Sequence length61
%GC42

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG53.816793893129771No Hit
GCCTGTAGATGTGTCCCTCATCCCTTCATGCCTCCCTCTTCACTCCTCTTTTACTTTCTAC21.5267175572519083No Hit
TATCATCGGAGCGGAAAATGTGTCTTAGGTTGTGGATGTGGATGTAGCAATCAGCAAGGAG10.7633587786259541No Hit
AACCCCATCAATTAACCTTACAGCACCGGGCAGCCCGTACTCTGCGTTGATACCTGTCTCT10.7633587786259541No Hit
CAGACATATAACTGAACTCCTCACACCCAATAGGACCAATCTATCACCATATAGAAGAACT10.7633587786259541No Hit
GTATCACCGCAGGGTGGGGTTGTTTTTTTTTTTGTTTTGTTTTGTTTTTGTGTTGGGGGTG10.7633587786259541No Hit
AATGAAGCCTCCTATGATGGCAAATACAGCTCCTATTGATAGGACATAGTGGAAGTGGGCT10.7633587786259541No Hit
CTGAAAAGACGATCAAAAAAAAATAAAATAAAACCAAAAAAATCAACATAAAACCAAAAAA10.7633587786259541No Hit
GTTTTATTTTTTTCCTTTATTCTATTTCTCCTTTTATTTTCTTTTTTTTTTTTGTTCAATT10.7633587786259541No Hit
ACAAAAAACCATAAATTAGAAAACCCAAGATCAAATCAAAAAAAAAAAAAAAAAAAAAAAA10.7633587786259541No Hit
GAGTGTGTAGCGTTTAATAGTTTCGTTTTTGCCTTCTATTTATTGGGGGGTGTGCGGTGGT10.7633587786259541No Hit
GGGGGGGGGGGCCGGGGCGGGGGGGTGGGGGGGGGGGGTTTGGGTGGGCGGGGGGGCGGGG10.7633587786259541No Hit
GGTATCAACGCAGAGTCGAGATATTATTTATTTTTTTTTTTTTTTAGGTGTAAGACATAAG10.7633587786259541No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGTGGGGG10.7633587786259541No Hit
GAACGATGATGACACCATAAAATCTCAGGAGGAAGATCAGCCAATAATTATTAAAAGGAAA10.7633587786259541No Hit
ACTTTCACCTTGTCCCGTACACCATAACGCACCAATAATCTTTGTATTAAATTCTGCGACA10.7633587786259541No Hit
GAGGCGGCAAATATCCTGTGATCCGGAGATTTCTGAATGGGGAAACCCACTTACCATAAGG10.7633587786259541No Hit
CATTTACACCAACCACCCAACTATCTATAAACCTAGCCATGCCCATCCCCTTATGCGCGCG10.7633587786259541No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAATAAAAAAAAAAAAGGAGGGGGGGG10.7633587786259541No Hit
CACTAAGCAAAACAAATCAAAAGAGATTCACTCAGTAGCGGCGAGCCAACGGCGATCAGAC10.7633587786259541No Hit
ATATCAACTAAGAGTACTGGAAGACCTAAATGCCAAAAAAAATAAAAAAAAATCTCAAGAA10.7633587786259541No Hit
AACATATTCTAGATTCCATATCAACAAAATGGTTAACGAAATCGATGTTTGATCAGGACAT10.7633587786259541No Hit
TTACTTCAGGGATCACACTACGCTAAAGCACCGCTGCTGCCCGCGTATCTTCATCGACATG10.7633587786259541No Hit
GATCTGTGCCATTTAACTTCTCACCAAACATGGTGAGGAACATGGTGAAATTGATGGGGCC10.7633587786259541No Hit
CATTGGTACCTGGCTCTCTGCGTAGGATAACCTTGAACTGAGGATTCCAGAACCAGGATGA10.7633587786259541No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGTGGGGGGGGG10.7633587786259541No Hit
CATAAATAGAGAGCACTGAACCCAACCAAAAGCCACTAACCAAATACATGAGAAATCCACA10.7633587786259541No Hit
GTTTAGTATAGCCGCCACTAGTGATGTGATGTGATAACAAAGAAAAAACCCTGTCTCTTAT10.7633587786259541No Hit
GTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTGGGGGGGGGGGGTTTTTTTTGT10.7633587786259541No Hit
GTGTAGAACTCGGTGGACGCCGGAGCATAAAAAAAAAAATAAAGAAGATAATGTACATGTT10.7633587786259541No Hit
GTATCAACGCAGAGTGGAGGTTTTTTTTGTTTTTTTGTTTTTTTTTTTTGTTTGGGGGGGT10.7633587786259541No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTG10.7633587786259541No Hit
CATAAAAAAAACCAATAAGAAAAAAAAAATAAAAAAAAGTTTTCGAATGAATAAAAAAATA10.7633587786259541No Hit
GTATCAACGCAGAGTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAAAAAGG10.7633587786259541No Hit
GCGCAGAGTCGGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGTGTGGGGTCGGGGGTGG10.7633587786259541No Hit
GCTGTACACATAGAGCCTGAAAACAGGAGTAAAGATGAATAACACAAATTGGGTCATGACA10.7633587786259541No Hit
AAACATTAGTGACGAGTATAGTAGGTTTTATGTAACTCATTTGTAGTACGAAGCTGGACTC10.7633587786259541No Hit
CTTCTACAAAAAAAAACAAAAAAAAACAAAAAAATAGACTTGAGACTAGGTTCACGTACTT10.7633587786259541No Hit
ATCCAACACCCACTGAAGTAGAAAATGCAGTTTAATCATGGAGCACTACAGTAGAAACTGC10.7633587786259541No Hit
CTGATATGTTGCGCGTACGTCTGTCAATGTTGCATCTGTCTCGTATACACGTCTGACGCTG10.7633587786259541No Hit
ATTAGGTGGTGGCTGCTTTTGGTGTACCGAAGCCGTATTTTTACAACTCAAAGGTGTCAAT10.7633587786259541No Hit
GCGCAACGTTATGCGCAACATAACAATACTGAAAGTAAATTAGAACCCGATATTAAAAATG10.7633587786259541No Hit
TCACAGCACATTATCCCTGTCAGCTCCTCCATGTCCCCCCGTTGCGCTACGTAGGACTGTA10.7633587786259541No Hit
GTAACACAAGTAACCGAAGACACAAGCCCCAGGCCCACCGCAAGACAACCCACAAAACCAA10.7633587786259541No Hit
GTATCAACGCAGAGTCGAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTATTTT10.7633587786259541No Hit
CAGCTTTTCCCACTCTGACCTCTGTTTTTTTTTTGTCTTCTTTCTTGTTTGCCCCTCGGTC10.7633587786259541No Hit
CCACTGGACATACTTGAAACAAAATAGGAAAATGGCAGCAAACTCTTCAGGACAAGGTTTT10.7633587786259541No Hit
GTATCAACGCAGAGTACGGGCAGACCACAAAAAAAACACCCCACCTCCTAACACCCAAACA10.7633587786259541No Hit
AATCAGAACACATAAAACAACAGTAATAAGCGAAAATAAAAAAAAAAAAGACAAAAATTAA10.7633587786259541No Hit
CGCATACCCAGGCTGAGTGAAAATGGATCAAAAAGTATAATCTGTATATTATACACATCTG10.7633587786259541No Hit
GACGAGAAACCAAATCAGTTCCCAGTTATGCTTTCAATGACTCTCTGGTAGACTCCATATC10.7633587786259541No Hit
ATCAACGCAGAGTACGGGACACAGATAAGCAATCCCTGAAACCTATTGAAGGAAGACCAAA10.7633587786259541No Hit
CAGTATTCCTGGTTCATTGATATTATAGTAAAATTGAGAAAATTTTTCTGAAATTTTTCTT10.7633587786259541No Hit
CAGGTCTTGCTCTGTCTCCCAGGCTGCAGTGCAGTGGCTCTCTCTCAGCACACTGCAAGCT10.7633587786259541No Hit
ACTGTATCAACGCAGAGTCGCCGTTTTTTTTTTTTTTTTTTTTTTTTTTTAACGGCAGCCG10.7633587786259541No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGG10.7633587786259541No Hit
GTGTAGATCTCGGTGGGCGCCGTATCATTAAAAAAATAAAGAAAGAGAAGGGGCAACGAGG10.7633587786259541Illumina Single End PCR Primer 1 (96% over 29bp)
CTCTAAAACCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7633587786259541No Hit
CAGGTTTTTTATGTTTGCGGTTTCTGGTGGTGGATCTCGCTCTATTCAACGGTTTCTTAGT10.7633587786259541No Hit
CAGTTGCAGGGGCCTGGTTTCTGTGGCTGCCAATAGCTCAAGGAGCAAGTCCTATCACCGT10.7633587786259541No Hit
AAGATGAGGAGCGCGTTGTGAGATTTATTTTGAAGATTTTGAATAAAAACCCAAAAAAAAA10.7633587786259541No Hit
GGTATCAACGCAGAGGCGGGTTGTTGTTTTTTTGTTTGTTTGTTTTTTGTTGGAGGGGGGC10.7633587786259541No Hit
AAGTACGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA10.7633587786259541No Hit
CTTTCACCCTTACCTTCCATTTCTCCGAAAAGAAACGTTATTGAAGGCGGTCTACTCTCTG10.7633587786259541No Hit
GTCCTATACCAATGCCAAATCTTGTAGGCTACGTTTTACAATTCCTGCATTTGGATCAGCA10.7633587786259541No Hit
CTCCCATCCATACGCATACTTTACATAAAATACTAGGTCAAAGATAACACAATTACCATCA10.7633587786259541No Hit
AAGTTATATGTGTTTTAGCGGAAAGCTCTCGGAAGTGCTCCCGTAGAGGGTGATAGTCCCG10.7633587786259541No Hit
GAAGAGACGCAGCGTAAGTTATAATGTTTATGCTTTGTAAATGATTTGTCATCGTAATGAT10.7633587786259541No Hit
AAAAAAAAAAATAAAACAAAAACAATCAAAATAAGGTCTCTTATACAAATGTGACGCTGAA10.7633587786259541No Hit
GTGTAGATCTAGGTGGTCGCGGTAGCATTATAAAAAAATGAAAAATTAAAAAATTAATAAG10.7633587786259541No Hit
GATCAAAATAGAAATAGAAAGGACTAAGGGGTCCACCGGGCGCCCGGGGTGAAACAAGTGC10.7633587786259541No Hit
CTTCATGGACCACAATTCGCTGTTGGCAAGAAAAGGCAATACTTACAAAACAGACTCTTTA10.7633587786259541No Hit
GTATCAACGCAGAGTCGACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAACTAAA10.7633587786259541No Hit
CTCATAATAGAGCACCCAGGATTTTAATAAGATTCATGCGTACTGAATTTCAAATGGACAA10.7633587786259541No Hit
CATTTAATGAGAGAACGACACTCACAAATTCAGACAATGAAGAAAGGATGACCTGTATCAC10.7633587786259541No Hit
GGACACGTCCACGAACACAGTGTACATGGAGCTGAGTAGTCTGACATTTGAGGACACGGCC10.7633587786259541No Hit
ACAGCAGGATATTTGCCGCCTCCCCGAAGCTTATCGCAGGCTATTACGTCTTTCATCGCCT10.7633587786259541No Hit
GCGTATATGGGCGTTTTGGTCGACGATTTGATTACCTTAGGTACCAAAGAACCGTACCGTA10.7633587786259541No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGGGTAT10.7633587786259541No Hit
CACCCAGCTGAAATAATAGATGGAATGATTGAAACAATTAATGCTTTTATAGCCATAAGGT10.7633587786259541No Hit
ACCAAAAAGACACCCCAGAACCCCACGCAAAAACACACCCACAAACTTCCAATCAAACCAA10.7633587786259541No Hit
GTTCTTCCGAGGCGTTACCATCAAGAGTGTCATTCTTCCACTTCCTCAGCATGTGAAGGAT10.7633587786259541No Hit
GATTTAAATAAATAACGTGAGTTCAACAACAAAATTCCAAAATCAAAAGCCATAATATTTT10.7633587786259541No Hit
GGATAACCGCTGAAAGCATCTAAGCGGGAAGCCTACCTCAAGATAAGATTTCCCTAGGACT10.7633587786259541No Hit
CAGACGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTAAGTGGGGGTTAA10.7633587786259541No Hit
GGATGAGAGCAGTTTTCACCTCGAAAAGATGTTCGAAATGGTCGAATAAGTTTAGATATAC10.7633587786259541No Hit
TCTTCCCCATGGTGAGCCATTAAATAAAAAAAAATATTATATGAATATATACCATACCCAA10.7633587786259541No Hit
GCATCCACCACATGCACTTAATTACTTGACCCGTACTCTGCGTTGATACCTGTCTCTTATA10.7633587786259541No Hit
TGAATACATAGTCATGCGACGCGAACGAGGGCAAGTGAAACATCTCAGTACCCTTAGGAAA10.7633587786259541No Hit
ACCCTGGACTTTGTGAAGTTGTTAGAGTACATGAGCATTACTTGGGTCATAAACCAGAAAA10.7633587786259541No Hit
GGCTAAAAGACTTCAAAATAGCATGGAAGTAATAATAGGCTCAGATAATTTGAAGCAGTCA10.7633587786259541No Hit
AACTATGAACGTACTTTGCTAAGTACTCATCTTTGAGTCTAGACGGATCTTAGACTGTACG10.7633587786259541No Hit
AGCAAAGGCACAGCCGAAGCCTCGGGCGTCTGACCAAACAAAAAAAGATAGTGCGGGACAA10.7633587786259541No Hit
GTGGTATCAAGTCAGAGTGGACGTGGTTGTTGTTTTGTGGTTGTTGTTGTTGTTGGGTGGG10.7633587786259541No Hit
GAAATATTTGCTATGGACGCCAAATCAGAGAATGAGCCCATTGAAAATTAAGATGACAAAT10.7633587786259541No Hit
GTATAAAATCACTCTACACAAAGAATATGCTCCCCCACTCACACACTTCATCACAAACACT10.7633587786259541No Hit
TCAAAACCACTAATCCAAAAATAAATAAATATTAAAAAATTTTAACCAAAAGTAAAAACGA10.7633587786259541No Hit
ACATTTTAAATTTAAATTATATATTTTTATATAAACAAATACCAGTCTCTTATACACATCT10.7633587786259541No Hit
GGGTGGAGTATATCGAGGGGGCTAGGAGGATTCAGGTGTACTAGAGTCGTCCGGGGCTGAG10.7633587786259541No Hit
TCATCAGGTTTATCCATCAGGTTTGTATCTGTGATTTGGATAATAACTCTATCTTTATCTG10.7633587786259541No Hit
GCTATATGATGATGGCTTTTAGAGATCCATTTTAAGATAGTGTTGTGTGATACTATGGTTG10.7633587786259541No Hit
GAGTGCAAGAGGAGGGGTGGGTTTGTAGTGGTGTTTTTGGTTTGGTTTGGGGGTGTGGCGG10.7633587786259541No Hit
TGGGATACCAACCTTAAGCTAAGTGGGTTTCCCCATTAAGAAATGTCCGGAGCCCATGATA10.7633587786259541No Hit
CCACGTTTAATGTAGTTAATGCCGCCACCTGGTACGATTTTCAAATATTTTTCGCCTAAAA10.7633587786259541No Hit
CATTATATTTAGATGCAACACCGAAGTTACCTGCAACAGCAGCAGCAAAACCGTAGTGGTT10.7633587786259541No Hit
GCTTAATGCTAAGAAAATAAAATAAAGATTCTAAAAAAATTTAAAAAAAAAAAAAAAAAAA10.7633587786259541No Hit
GAGCCCAAACAAAGCAACAACAAAAAAGGAGGAATTTTATGGTAGTTGAAAGTCCGAAGGG10.7633587786259541No Hit
ATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTCTGGTG10.7633587786259541No Hit
GAGACCAGGATTTTAAATTTTATAATTTATATTTTACCAGCCAGAAATGTTAGAAAGCAAG10.7633587786259541No Hit
TACCAACGTCGATTCCAAATTAAATATAATTTGGGGGGATTAGCTGGGGGTCTGGATTGTT10.7633587786259541No Hit
CTGCTGAAACAGACCACACAGTATCACTACCTTTTACACACTGAACACTACCCAGGTTAAA10.7633587786259541No Hit
GAAATCTCCGGATCACAGGATATTTGCCGCCTCCCCGAAGCTTATCGCAGGCTATTACGTC10.7633587786259541No Hit
CTATCAATGTTCCAGCTGGAAAAGCAATGAGCATTGATGCAACATTCTACTCAGGTCCAAA10.7633587786259541No Hit
GTAATTAAGTGCATGTGGTGGATGCCTTGGAAGTCAGAGGAGATGAAAGACGTAATAGCGT10.7633587786259541No Hit
GAAAAATAAAAGAATAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAA10.7633587786259541No Hit
GGGGGCGGCGGAGTGGTGGGGGGTGGGGGGGGGTGGGGGGCCGGGAGGAGGGACGCAGGTG10.7633587786259541No Hit
GGAAAAAGACTAGCACTAGGTGCTCGACGTCTAATTAATAAAAAAAAAGATGAATTGAAAA10.7633587786259541No Hit
AAGAAATGAATTGAGATGCCGTCAGTAGCGGCGAGCGATCGGGGATCAGCCCGGTATGTTA10.7633587786259541No Hit
AAAAAACACAGAGACAAAAACAGAAAATCAACAACAAAGAAAAATAAAAAAAAAAAAAATA10.7633587786259541No Hit
CCCCCCCACCACACTCCAAGGACAGAAAAAGCCCGAAAAAACCCCACAACAACCGCGCCGC10.7633587786259541No Hit
GATTACGGGAAAAAAAAAAAAAAAAAAAAAAAAAGAAGACCAATAATTTTAATAGAGATGG10.7633587786259541No Hit
TATCTACTCAGTATAATGTATATTAAATTTATATGGAAAAAATGTCATTATAGAAAAGTTA10.7633587786259541No Hit
CCATTCATCTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAGGGGAAA10.7633587786259541No Hit
TATCAACGCAGAGTACGGGACCGCAACCTAAAAAACAAACACTAAACCGACAAAACCAAAC10.7633587786259541No Hit
GTATCAACGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTTTTGGG10.7633587786259541No Hit
GCAGTAGCCTTCTGAGTGGTTTCTCACAATTCCTGCCCTCCTATAATCCAGTCGTCACCAC10.7633587786259541No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers