EGAF00005414585 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005414585
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	532537
Sequences flagged as poor quality	0
Sequence length	61
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAATAGCCT	801	0.15041208404298667	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	788	0.14797093910845632	No Hit
ACGTAATAGCCTGCGATAAGCTTCGGGGAGGCGGCAAATATCCTGTGATCCGGAGATTTCT	640	0.12017944293072594	No Hit
TCCCAGAGCTTTCCGCTAAAACACATATAACTTAATGGGCTGATCCCCGTTCGCTCGCCGC	628	0.11792607837577483	No Hit
ACTATGTATTCATCATGCGATACCTACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCT	586	0.11003930243344594	No Hit
ACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCTCCGGATCACAGGATATTTGCCGCCT	565	0.1060959144622815	No Hit
ATACATAGTCATGCGAGGCGAACGAGGGGAAGTGAAACATCTCAGTACCCTTAGGAAAAGA	544	0.10215252649111706	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTGGTAT	450	31.18163	1
GTATCAA	2560	30.522457	1
TGGTATC	490	29.747997	2
ACGGGTA	200	27.502867	16
TATCAAC	2895	27.455364	2
GGTATCA	1100	27.01296	1
TCAACGC	3045	26.005234	4
ATCAACG	3060	25.970047	3
CAACGCA	3060	25.877756	5
AACGCAG	3050	25.782305	6
CGCAGAG	3100	25.366465	8
AGAGTAC	3075	25.306826	11
ACGCAGA	3155	24.924257	7
CAGAGTA	3155	24.83711	10
GCAGAGT	3270	24.131798	9
TACGGGT	695	23.347755	15
CTGCCGA	495	23.335764	55
TGCCGAC	260	23.271654	55
AGTACGG	3320	22.698149	13
GAGTACG	3410	22.498117	12