EGAF00005414702 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005414702
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	347785
Sequences flagged as poor quality	0
Sequence length	91
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGA	670	0.19264775651623847	No Hit
ACCTTATGGTAAGTGGGTTTCCCCATTCAGAAATCTCCGGATCACAGGAT	527	0.1515303995284443	No Hit
ACGTAATAGCCTGCGATAAGCTTCGGGGAGGCGGCAAATATCCTGTGATC	500	0.14376698247480485	No Hit
GTGGTATCAACGCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	479	0.13772876921086305	No Hit
ACTATGTATTCATCATGCGATACCTACCTTATGGTAAGTGGGTTTCCCCA	445	0.12795261440257633	No Hit
ATACATAGTCATGCGAGGCGAACGAGGGGAAGTGAAACATCTCAGTACCC	408	0.11731385769944075	No Hit
TCCCAGAGCTTTCCGCTAAAACACATATAACTTAATGGGCTGATCCCCGT	390	0.11213824633034777	No Hit
GTACTGAGATGTTTCACTTCCCCTCGTTCGCCTCGCATGACTATGTATTC	357	0.10264962548701066	No Hit
GGGTACTGAGATGTTTCACTTCCCCTCGTTCGCCTCGCATGACTATGTAT	356	0.10236209152206105	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACGGT	25	0.0077962424	50.992496	3
GTATCAA	1485	0.0	44.36012	1
GAGTGCG	40	9.317175E-4	42.493744	9
ATAAGAC	40	9.317175E-4	42.493744	3
TGGTATC	350	0.0	41.285572	2
GTGGTAT	375	0.0	40.799866	1
GGTATCA	770	0.0	38.636234	1
TATCAAC	1735	0.0	37.478264	2
TCAACGC	1850	0.0	35.143475	4
CAACGCA	1875	0.0	34.44826	5
ATCAACG	1915	0.0	33.950615	3
AACGCAG	1930	0.0	33.466576	6
ACGCAGA	2020	0.0	31.975492	7
CGCAGAG	2070	0.0	31.203138	8
TATACAG	70	3.9410387E-4	30.352674	5
GCAGAGT	2140	0.0	30.182474	9
CTATAAA	90	5.14505E-5	28.333237	1
CAGAGTA	1700	0.0	25.49625	10-11
CTATGCT	150	9.784162E-8	25.496246	4
GTCTTAC	85	0.0012248586	24.999916	1