FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005414749

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005414749
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84
Sequences flagged as poor quality0
Sequence length61
%GC43

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTTAGACGTAATAGCCTGCGATAAGCTTCGGGGAGGCGGCAAATATCCTGTGATCCGGAA11.1904761904761905No Hit
CTAATAATCCTCTCCATGATGTCTTCGTTAGAAAAGTAAAAATTATGAAGAAGCCCAAGTT11.1904761904761905No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGG11.1904761904761905No Hit
GGTATCAACGCAGAGAACGGGATGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.1904761904761905No Hit
GTGTAGGTGGCATTTTCAAGGACGATATTGGTTGGCGAAGTTCTTTCTATTTTTTCTGCAT11.1904761904761905No Hit
AGAACTCGCTCTGGAACACCTGGGATCTGGTCAGCTGGGGGAAATGTCTATACAGGGGCTC11.1904761904761905No Hit
GATAAATCGTCTCTTTGGTCCGAAATGAGTTAATCTAATGCCTATAAGTTTTCTTAAACAT11.1904761904761905No Hit
TAACGAAGTATATAAATTATTAAATCACATATAAATGCAAATTCTGCCCCCCCATGAAGTA11.1904761904761905No Hit
CATCTTAACCTGCCGACCATATGCATTGTGTAGATCACGGTCGGCGCCCTTTCATTAAAAA11.1904761904761905No Hit
GAATATAACCCACTACCTTACAACATCCCATAGCATACCACAACAACACAAAAAACTAAAT11.1904761904761905No Hit
CAGGAATGGCAAACGTTTACCTGAAAAGGACGATCAATTTACTATTACCAGCCAAATCCAA11.1904761904761905No Hit
CTATAGCACCCCCTCTACACCATAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA11.1904761904761905No Hit
GGTTAATTGATGGGGTTAGCGTAAGCGAAGCTCTTGATCGAAGCCCCAGTAAAAGGCGGCC11.1904761904761905No Hit
CATATAACTTAATGGGCTGATCCCCGTTCGCTCGCCGCTACTGAGGGAATCTCAATTGATT11.1904761904761905No Hit
GCTAATATACTCACATTAACGTATTTCATCTATCACTTAGACAACACACCGGAGAATGAAT11.1904761904761905No Hit
TTATTGAAGACCCGGTTTTGGTCGGGTCAAGTTTCGTTTTCACGTTCTCTCTCGATCTTGT11.1904761904761905No Hit
ACGCAGAATCGAAGTTATTATTATTTTTTTATAATTTATTTTTAAAGATATTTTTAATAAA11.1904761904761905No Hit
CAACTATCACCTCATCGACCACTGTCAGTATTAAGACTTCCACATACCGCACATCTACCAC11.1904761904761905No Hit
ATCACACACCCATGGTTTAGCCTCTTCCGCTTTCGCTCGCCACTACTCACGGAATCACGGT11.1904761904761905No Hit
GTATCAACGCAGAGTACGGGTGTGAAATAAAAAATCTAAGTATCCCTGTCTCTTATACACA11.1904761904761905No Hit
GATTAAAGATCACCAAGCTCTAAATGAATTTAAACAAAAAAAAGATGATGAAAAGTAATTT11.1904761904761905No Hit
TGATTGCTCCATCGACTTCGACTTCCATAGAGAGATTTTCCGTTCTCATTACATGTGTCGA11.1904761904761905No Hit
ACATATAACTTAATGGGCTGATCCCCGTTCGCTCGCCGCTACTGAGGGAATCTCAATTGAT11.1904761904761905No Hit
GTGCTATCAACGCAGAGTCGACGAATTTTAAATTTATATTATAAATATATATTGATAGAAC11.1904761904761905No Hit
GTTTAACTTTGTAAGATGCAAAGAGGTTGGATAAAGTTTAAATGACTGTGCTGCCCCTTTA11.1904761904761905No Hit
ATCAATCATTATAAATTTTCTTTTTTATACAGCTTCATATTAAAAAGTGTTTATAAAATTA11.1904761904761905No Hit
GGTCAAGTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTAA11.1904761904761905No Hit
GCACAAAGATCTTCCTCCCTACCAAGATAAATGGTTCTACACGCGAGCTGCTTCCACAGCG11.1904761904761905No Hit
CAATAAGGTAGGTATCGCATGATGTATACATAGTCATTGGAGTCGAACGAGGGGAAGTTAA11.1904761904761905No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG11.1904761904761905No Hit
GGTACTCTTCGGCAGAAGAGCTAATATATAATTGAAATAGGGCTCATCAGCCAGCGCCTGC11.1904761904761905No Hit
GATTAAAAGAATTGAATCTAAAAATAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAA11.1904761904761905No Hit
CTGTGGTTGACAAAGCGCATAACAGACTTATGTAGTACTAGTGATCATATCTTCGATTGTA11.1904761904761905No Hit
TGTGACGCCAGTCGCATCGCCGGGTAGCTATGTTCGGAAGGGATAACCGCTGAAAGCATCT11.1904761904761905No Hit
GAAACGATATCGTGAAACCCGCAAGGAACGAACACACCCACCCCCAATTAAACCAACGGGA11.1904761904761905No Hit
GACTTCGCTCGTACTCGTGCGCCTCGCTTCGCTTTTCCTCCGCAACCATGTCTGACAAACC11.1904761904761905No Hit
TCACACACTCCAGTCAAGGCACAAAAACAATAAAAATAATAAAAAAAAACGAGGAATAGGC11.1904761904761905No Hit
TAATATATCCATTTAAAAAAAACTAAATCACCCAATAACAGAATATAAAAACCATCCCCAA11.1904761904761905No Hit
GGGTAATGAAAGAGACTTGTGACGAAGTGTTAAGTGCACATGGTATCAATGAAACACCACA11.1904761904761905No Hit
GGCTTGCTGTGGGTCAACACCAAAGAATTTCCATGCAACAAAAGCGACGATTAAACCCAGG11.1904761904761905No Hit
GTGGTATCAACGCAGAGTCGACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTGAA11.1904761904761905No Hit
CTAAAACACATATAACTTAATGGGCTGATCCCCGTTCGCTCGCCGCTACTGAGGGAATCTC11.1904761904761905No Hit
CAGTGGAACACTCTGGCTACAAAAAATCTTTAGCCATAGATGCCGTCGGAAAAGGTGAAGG11.1904761904761905No Hit
CTACAGCGACAACGATCCGGCACCACAAAAAACGCAAAGCGGCCCTATGCGCAGTAGGAGC11.1904761904761905No Hit
GTTTATGGAATATCCAGTTTGAAAATGAGCAGGGTATTTATCACATACAAGCGAAGGCTTT11.1904761904761905No Hit
GAATTACAGAAGACAACAACAATGCCCAGAAAAATTTAAAATTAGTAGATACAAGCTATTG11.1904761904761905No Hit
ATACACAGATAAAATAATGAAATGAAAAATAAATAAACAGATGCCGGTCAATAAAGTTACC11.1904761904761905No Hit
AGGCTTCTCTGCTGGATGGCCCTCTGTCTACTGGGGGCAGAACTCTCAGAAGCAGAAGTTG11.1904761904761905No Hit
GTAATAAGTCTTTCATCGACTCTGACTGACAAGGCATCAACCACATGCACTTAATCTGTCT11.1904761904761905No Hit
GTATCAACTCAGAGTCGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATAAAAA11.1904761904761905No Hit
GTATAATATAAGACTATTTTTTTTTTTGAGTATAAAAATAAGATATGTAACTTAGACAAAT11.1904761904761905No Hit
GTGGTATCAACGCAGAGTCGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCCGCGGAC11.1904761904761905No Hit
TCTAACCTAAGTTTGTAGTCAAAAATACAATGGTCAATAGAAAAATGGCAATCTCATTAAC11.1904761904761905No Hit
CACGTATTCTTATGGCATATATCTTTCTTGTTGCAGGTTGGGGCAAAATCACGGCTTACAG11.1904761904761905No Hit
AACAAAAGTTAAATCGATTTGAAAAAAAAGTTTGACATTTTTATTGAATCTTTAATACTTA11.1904761904761905No Hit
GCCTCTGAATGCCAAAGCATCCCCCAAATTCACTTAATTACTTGACCCTTACTCTGCTTTG11.1904761904761905No Hit
AGATAAACCGAAAGAAAAGAAAAAGCACAAGAAAATAATAGCGAGAAAAAAAGAAGGATAG11.1904761904761905No Hit
GGCGGCGGGGGGGGGGGGGGCGGGCGGGGGGGGTGGGGGGGGGGGGGCGGGGGGGGGGGGG11.1904761904761905No Hit
GGAATGGTCGATTGGAGATTACGTATTATCAGGCGGTGAACTCCCTGCGATGGTTTTAATG11.1904761904761905No Hit
CACCAAATACATTATCTCCTTAAGCCACCTGAGGTCCGAGTCTGATTACCTGTTATTACTT11.1904761904761905No Hit
CTTTTCAAGAGAAGTGCAAGGCTTTACTTTGAAGAATTTAAATTAGTCCGGTAGGATGTCA11.1904761904761905No Hit
GTAGCTGGCGCAAAAGTAACTGCAGAAGACATAGTCATGCGAGGCGAACGAGGGGAAGTGA11.1904761904761905No Hit
GAGTACGGGGTGCTGCGCGGAGTTAAGCGGCCCCGCAGTGAGTTATGGGTAGTGGACGAGG11.1904761904761905No Hit
GTACGGGGTCAAGTAATTAAGTGCATGTGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAG11.1904761904761905No Hit
TATCAACGCAGAGTCGACAATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAA11.1904761904761905No Hit
CAACAAATCTAAGGAGAAAAAAAAAAGGAAATAATGTAGAAATCGATAAACAAAAAAAAAA11.1904761904761905No Hit
CCATAAGGTAGGTATCGCATGATGAATACATAGTCATGCGAGGCGAACGAGGGGAAGTGAA11.1904761904761905No Hit
ACGGAGTGTAATCAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAA11.1904761904761905No Hit
GGGGGGGCTGGCGGGGGGGTTTTGGGGGGGGCGGGTCGGGTGGGGTGCGGGGGGGGGCGGG11.1904761904761905No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGTGGG11.1904761904761905No Hit
GCTTACTCTCTATCTCTAAAAAGTCAATCAATAATGTTAATTATTTTTTCTAACAAACCCA11.1904761904761905No Hit
GGTTGAGACTTGCAATCATTTTTGGTTTAAAATATTATTGTTTTTTGTTTTTTTTTATTTG11.1904761904761905No Hit
CAGTCAAAGAGAAAAAAAAATCTAAATAAGGAAGAAGAAGTCGATGGAGCAATCATCAAGG11.1904761904761905No Hit
GAGAGGACGGAGAAAGTTAAGTCAGCCTGGCGTTGGTTGTCCAGGTGAAAGGCAGTAGGCA11.1904761904761905No Hit
TAAATAAATCACAAGACGTCTTGCACTCATGACCAGTCCCAACATTAGGCTTAAAAAAAGA11.1904761904761905No Hit
ACAGGAGTAACGACAAAACGGGTGAAAAACCCGTTCGCTGAAAGACCAAGGGTTCCAGTCC11.1904761904761905No Hit
GCTTGACGTGGGAGACTGCGTTAAGCCTAGGGGAGTTGTCAACCGAGCGGTGATCCTAGGA11.1904761904761905No Hit
GGGGGAGGGGGGGGGGTGGGTGGGGGTTGGGTGGGGGGGGGGGGGGGGTGGAGGGGGAGCA11.1904761904761905No Hit
GGTGAGGGGGGGGGGGTGGGGTGGGTGGGGGGGGGGGGCGGGTTGGGGGGGGGGGGGGGGG11.1904761904761905No Hit
TTAAAGCCCACTCTAACAGGAATATTTTAATTTTTTTATTAATAAAAAAGGGGCTGGTAAA11.1904761904761905No Hit
TCCCAAGTTAAGCTCGGGGATTTCACATCCGACTTAAAAAGCCGCCCTGTCTCTTATACAC11.1904761904761905No Hit
GTAGGTGACAGCAGTCGGTTGGAGGGGCGTCCCCCAAAGTTCACAATCCCGTACTCTGCGT11.1904761904761905No Hit
GTGATTAACAGAGGGCATATGGAAACACAGCGTTTGATGGATCGACAAAGGCAGGATGCAC11.1904761904761905No Hit
GTGGAGGGTGGGGTGGTTGGGTGGGAGGTGGGGGGGGGGTGTTAAGAGGTGGTGGGTTTTG11.1904761904761905No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)