EGAF00005415925 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005415925
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17371461
Sequences flagged as poor quality	0
Sequence length	125
%GC	32

Per base quality graph

$Per base quality graph$

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	82269	0.4735871093398535	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	50788	0.292364585799663	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	50690	0.29180044211595096	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	35452	0.20408185586693026	No Hit
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAG	29324	0.16880560593032445	No Hit
TGGGTTTTGTTATTTTAATAAATTTTGTTTTTGGGTGGGTGTGGGTATAA	28358	0.16324476104802008	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	27824	0.1601707536286096	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	26245	0.1510811324390044	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	25111	0.14455318409890797	No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGT	20491	0.11795783900962618	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGCGC	38605	115.45904	1
CGGGTGC	11550	115.07696	1
CGGTTAA	89080	113.24093	1
CGGGTAC	14525	112.64924	1
CGGCTAA	760	105.13602	1
GGGCGCG	44985	104.24203	2
CGGATGC	1310	100.14095	1
CGGGTAT	35395	99.3121	1
GGCGCGG	46730	97.34478	3
CGGAATA	23630	97.00183	1
CGGGTGT	31315	96.61807	1
GCGCGGT	46225	96.58064	4
CGCGGTG	47505	95.88193	5
CGGGCGT	47875	95.618744	1
CGGGAGG	117145	95.34999	1
GGGAGGC	53035	95.26242	2
CGGTAAT	13320	93.47308	1
GCGGTGG	67485	90.87435	6
CGGAAAT	10555	90.84229	1
CGGTGGT	84190	90.721664	7