EGAF00005415966 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005415966
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18446932
Sequences flagged as poor quality	0
Sequence length	125
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	77124	0.41808578250302	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	43975	0.2383865241114349	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	33363	0.18085934289777836	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	31672	0.1716925069165973	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	30028	0.16278045585032785	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	25297	0.1371339147344393	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	25253	0.13689539268643697	No Hit
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAG	20473	0.11098322474436398	No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGT	18675	0.10123634651008635	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGCGC	36940	114.79479	1
CGGGTGC	11270	113.95912	1
CGGTTAA	87780	112.49794	1
CGGGTAC	13535	111.98108	1
GGGCGCG	43140	103.48609	2
CGGCTAA	605	99.53902	1
GGCGCGG	44690	97.03465	3
CGCGGTG	44895	96.57832	5
GCGCGGT	44245	96.03397	4
CGGGTAT	35820	94.797195	1
CGGGTGT	30765	94.07413	1
CGGAATA	22940	94.01181	1
CGGGCGT	47585	93.88863	1
CGGATAC	1595	91.212944	1
GGGAGGC	42885	90.21477	2
CGGGAGG	100870	89.8481	1
GCGGTGG	64800	89.451355	6
CGGTGGT	79125	89.39997	7
CGGTAAT	12975	88.96626	1
CGGGTTT	68570	88.598175	1