EGAF00005416015 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416015
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20051919
Sequences flagged as poor quality	0
Sequence length	125
%GC	31

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	51577	0.25721727681026435	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	39851	0.19873908327676768	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	32723	0.16319136338023307	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	30734	0.15327211325758897	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	27887	0.1390739709251768	No Hit
TGGGTTTTGTTATTTTAATAAATTTTGTTTTTGGGTGGGTGTGGGTATAA	27127	0.1352838099934475	No Hit
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAG	26123	0.13027680792047883	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	25118	0.12526481879365262	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	22990	0.11465236818481064	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGTGC	11245	113.46473	1
CGGTTAA	124325	113.24431	1
CGGGCGC	27745	109.02067	1
CGGGTAC	11155	107.278145	1
CGGCTAA	770	103.6609	1
GGGCGCG	34045	97.44708	2
CGGAATA	25245	96.64635	1
CGGGTGT	29115	95.87081	1
CGGATGC	1300	93.93153	1
CGGGTAT	33250	92.27856	1
CGGATAA	10335	91.81342	1
CGGGCGT	40040	90.89668	1
CGGTAAT	12615	89.998764	1
CGGAAAT	11080	89.77959	1
CGGGTTT	72735	89.59314	1
CGGGAGG	82290	89.57752	1
GGGAGGC	33210	89.10621	2
GGCGCGG	36340	88.50121	3
CGCGGTG	36120	88.0028	5
CGGAATT	23030	87.65537	1