EGAF00005416210 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416210
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19219664
Sequences flagged as poor quality	0
Sequence length	125
%GC	33

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	55358	0.2880279280636748	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	52552	0.2734282971856324	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	37720	0.1962573331146684	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	30049	0.1563450849088725	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	28656	0.14909729951574596	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	25022	0.13018958083762547	No Hit
CGGTGGATTTTTCGGTTTAAGTTTTGGTAATACGGTGAAATTTCGTTTTA	21434	0.11152120037062041	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	21222	0.11041816339765356	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGTGC	11050	112.25737	1
CGGGCGC	30360	110.583046	1
CGGTTAA	85890	110.41862	1
CGGGTAC	12480	106.93745	1
CGGCTAA	575	101.544075	1
GGGCGCG	36360	97.63643	2
GGGAGGC	57395	95.392334	2
CGGGTGT	35915	93.66156	1
CGGGTAT	41500	93.288475	1
CGGAATA	23485	92.41979	1
CGGGTTT	86680	91.78863	1
CGGGAGG	131840	91.33946	1
CGCGGTG	37795	90.14468	5
GGCGCGG	38060	90.14261	3
CGGTAAT	12990	90.0342	1
CGGAAAT	11155	89.622856	1
CGGATGC	1260	89.36915	1
GCGCGGT	38020	88.6568	4
CGGATAC	1445	88.647606	1
CGGGTAA	10345	88.40448	1