EGAF00005416377 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416377
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10422908
Sequences flagged as poor quality	0
Sequence length	125
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	40874	0.39215543301351213	No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	31755	0.30466545420913244	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	30683	0.294380416674502	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	23793	0.22827602431106558	No Hit
CGGAATGGAATGGAATGGAATGGAATGTAAAGTAATGGAATTAATTCGAT	20087	0.1927197285057107	No Hit
CGGGAGGCGGAGTTTGTAGTGAGTCGAGATCGCGTTATTGTATTTTAGTT	15106	0.14493076212511902	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAATTCGAGTGTAA	13664	0.13109585156081202	No Hit
CGGGAGGCGGAGTTTGTAGTGAGTCGAGATTTCGTTATTGTATTTTAGTT	12464	0.1195827498429421	No Hit
CGGGTGGAGTGGAATGGAATGTAATGGAGTGGAATGTAATGGAATTTAGT	12216	0.11720337548791566	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	11750	0.11273245432080951	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATTAATTCGAGTGTAATGGAA	11107	0.10656335065031754	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGTGC	7390	108.806076	1
CGGTTAA	42610	107.32923	1
CGGGCGC	18695	100.474014	1
CGGGTAC	6900	98.33271	1
GGGAGGC	44620	96.83818	2
CGGGAGG	98355	95.3618	1
CGGGTGT	24920	94.69726	1
CGGCTAA	415	91.78551	1
CGGGTTT	46415	91.41395	1
CGGTAAT	7705	90.9172	1
CGGGTAT	25310	90.46327	1
CGGGTAA	6420	90.29551	1
GCGGAGT	29105	89.924614	7
GGGCGCG	22565	89.48047	2
CGGAATG	82510	87.81505	1
CGGGAAG	11975	87.67288	1
CGGATGC	695	84.77985	1
CGGAATA	12190	84.61301	1
CGGAGTG	8335	84.47367	1
CGGGATA	5500	83.54046	1