EGAF00005416418 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416418
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22193950
Sequences flagged as poor quality	0
Sequence length	125
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	66580	0.29999166439502656	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	54613	0.2460715645479962	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	49089	0.22118189867058363	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	42428	0.19116921503382678	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	39917	0.1798553209320558	No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	38237	0.17228569046970008	No Hit
CGGGTGGAGTGGAATGGAATGTAATGGAGTGGAATGTAATGGAATTTAGT	29626	0.13348682861770889	No Hit
CGGAACGGAATGGAATGGAATGGAATGGAATTAATTCGATTGTAATGGAA	27894	0.12568290006961358	No Hit
CGGAATGGAATGGAATGGAATGGAATGTAAAGTAATGGAATTAATTCGAT	26717	0.12037965301354649	No Hit
CGGGAGGCGGAGTTTGTAGTGAGTCGAGATCGCGTTATTGTATTTTAGTT	24613	0.11089959200592954	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGTGC	9595	108.5091	1
CGGTTAA	65770	105.99277	1
CGGGCGC	23225	102.01847	1
CGGGTAC	9655	100.30856	1
GGGAGGC	68890	97.45426	2
CGGGAGG	155435	94.41183	1
CGGCTAA	605	93.52721	1
CGGGTTT	75425	92.20374	1
GCGGAGT	47810	91.96937	7
CGGGTAA	11670	90.89978	1
GGGCGCG	28540	90.52015	2
CGGTAAT	12190	90.44248	1
CGGGTGT	38030	90.353294	1
CGGAATA	30745	89.173584	1
CGGGTAT	37945	88.954605	1
CGGAGTG	15515	88.79604	1
CGGATTG	13735	87.85784	1
CGGGGAC	2575	87.2035	1
CGGGAAG	20820	87.08307	1
CGGAGTA	13960	86.22847	1