EGAF00005416423 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416423
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17254382
Sequences flagged as poor quality	0
Sequence length	125
%GC	33

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	37269	0.21599730433695044	No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	36367	0.21076964680624316	No Hit
CGGGTGGAGTGGAATGGAATGTAATGGAGTGGAATGTAATGGAATTTAGT	35771	0.20731545180812616	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	30932	0.17927040215059573	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	25129	0.14563836595248675	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	23721	0.13747812005089488	No Hit
TGGAGTAGTGAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	20344	0.11790628027129571	No Hit
CGGAATGGAATGGAATGGAATGGAATGTAAAGTAATGGAATTAATTCGAT	17437	0.10105838621168814	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGTGC	10130	109.818306	1
CGGTTAA	54125	105.80846	1
CGGGTAC	10450	103.638855	1
CGGGCGC	23370	102.91496	1
CGGGTGT	36050	94.79247	1
GGGAGGC	49740	94.15204	2
CGGGTTT	69000	92.98352	1
GGGCGCG	28620	92.16985	2
CGGAGTG	11965	91.168816	1
CGGGAGG	121065	91.14519	1
CGGGTAT	37925	91.08795	1
CGGTAAT	11425	90.90378	1
CGGGTAA	9875	90.87756	1
CGGAATA	18630	90.31158	1
CGGATGC	870	89.75679	1
CGGCTAA	410	87.904396	1
GCGGAGT	32625	84.46819	7
CGGTATT	29185	83.68562	1
GGCGCGG	30690	83.184875	3
CGGGAAG	17165	83.14685	1