EGAF00005416555 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416555
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21192891
Sequences flagged as poor quality	0
Sequence length	125
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	60997	0.2878182122486262	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	47156	0.22250857610695965	No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	43195	0.20381834644456953	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	41989	0.19812775897351617	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	39968	0.18859154232426337	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	37487	0.17688478650694708	No Hit
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAG	29001	0.1368430574195847	No Hit
CGGAATGGAATGGAATGGAATGGAATGTAAAGTAATGGAATTAATTCGAT	28727	0.1355501710455643	No Hit
TGGGTTTTGTTATTTTAATAAATTTTGTTTTTGGGTGGGTGTGGGTATAA	25516	0.12039886393979944	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	21244	0.10024116105726208	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGCTAA	1450	113.321594	1
CGGTTAA	94475	110.32939	1
CGGGTGC	9100	108.66754	1
CGGGCGC	23655	103.23912	1
CGGGTAC	9380	101.615524	1
CGGAATA	31090	96.837555	1
GCTAATT	1625	96.659676	3
GGGAGGC	53620	96.37032	2
CGGGAGG	131700	94.46021	1
CGGATGA	7930	92.71828	1
CGGAGTG	13685	92.35848	1
CGGGTTT	90735	92.253334	1
CGGGTGT	34270	91.98637	1
CGGGTAA	11730	91.814674	1
GGGCGCG	28865	90.94229	2
CGGTAAT	13815	89.59322	1
CGGGAAG	20525	89.04853	1
CGGGGAC	2840	88.88308	1
GCGGAGT	34560	88.320724	7
CGGGTAT	37335	88.05455	1