EGAF00005416576 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416576
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13004094
Sequences flagged as poor quality	0
Sequence length	125
%GC	33

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	49298	0.3790959985370761	No Hit
TGGGTGGAGTGGAATGGAATGTAATGGAGTGGAATGTAATGGAATTTAGT	38816	0.29849061380208414	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	22676	0.17437585425020766	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	22454	0.17266869956492165	No Hit
CGGGTGGAGTGGAATGGAATGTAATGGAGTGGAATGTAATGGAATTTAGT	20320	0.1562584829054604	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	17453	0.13421157983016732	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	17233	0.1325198049168208	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	16612	0.12774438572960176	No Hit
TGGAATGGAATGGAATGGAATGGAATGTAAAGTAATGGAATTAATTTGAT	13618	0.10472086713614959	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	13515	0.10392880888126463	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	13430	0.10327516857383527	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGCGC	24745	114.00036	1
CGGGTGC	7560	113.242294	1
CGGTTAA	55155	111.77514	1
CGGGTAC	9235	109.927505	1
GGGCGCG	29170	100.92285	2
CGGCTAA	515	98.32986	1
CGGGTAT	28785	97.06894	1
CGCGGTG	29930	94.83945	5
CGGGTGT	25085	94.31038	1
GCGCGGT	29875	93.878654	4
GGCGCGG	30450	93.708435	3
CGGGAGG	93470	93.236595	1
CGGAATA	11585	92.668564	1
GGGAGGC	38940	92.65644	2
CGGGTTT	52625	91.58622	1
CGGGCGT	36535	91.21936	1
CGGATGC	880	89.36449	1
CGGTAAT	8980	88.634705	1
CGGATAC	1180	88.35472	1
CGGGTAA	7450	87.88507	1