EGAF00005416790 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416790
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20656105
Sequences flagged as poor quality	0
Sequence length	125
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	47422	0.22957861610405253	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	41125	0.19909368198893257	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	37788	0.1829386517932592	No Hit
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAG	36180	0.17515402831269497	No Hit
TGGGTTTTGTTATTTTAATAAATTTTGTTTTTGGGTGGGTGTGGGTATAA	35506	0.17189107046076693	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	32537	0.1575175958875112	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	28615	0.13853047319424452	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	27803	0.13459943198390983	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	24895	0.12052126961980489	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGTTAA	118520	111.299614	1
CGGGTGC	14340	111.26168	1
CGGGCGC	28565	102.29284	1
CGGGTAC	12510	100.94528	1
CGGCTAA	690	100.91012	1
CGGAATA	26435	96.149765	1
CGGGTGT	38830	95.81854	1
CGGTAAT	16565	91.646736	1
GGGAGGC	43565	90.904465	2
CGGGTAT	39370	90.87649	1
CGGATGA	8035	90.80349	1
CGGGAGG	107375	90.418076	1
CGGGTAA	10900	89.648834	1
CGGGTTT	92115	89.56868	1
CGGAGTG	13110	88.56304	1
GGGCGCG	35915	88.21722	2
CGGAATT	27050	87.64962	1
CGGATGC	1400	87.56633	1
CGGATAA	11755	87.38083	1
CGGTATT	41025	86.54314	1