EGAF00005416799 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416799
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	12209075
Sequences flagged as poor quality	0
Sequence length	125
%GC	34

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	36232	0.2967628587751324	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	29224	0.2393629329003221	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	26604	0.21790348572680568	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	23420	0.1918245239708987	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	17247	0.1412637730540602	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	16548	0.13553852359822507	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATTTTGTTAGTT	16117	0.13200836263189472	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	13424	0.10995099956384903	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGCGC	18080	114.51172	1
CGGTTAA	91475	114.27482	1
CGGGTGC	5840	110.85002	1
CGGCTAA	560	109.74078	1
CGGGTAC	7165	108.17125	1
GGGCGCG	22375	99.97768	2
CGGAATA	15445	95.8424	1
CGGGCAT	175	95.46383	1
GGCGCGG	23170	93.69101	3
CGCGGTG	23185	92.70463	5
CGGGTAT	20815	92.35662	1
GCGCGGT	23265	91.412025	4
CGGGCGT	27750	90.28212	1
CGGAAAT	6755	90.2702	1
CGGGTTT	59220	90.13208	1
CGGGTGT	18530	89.99643	1
CGGATAC	1065	88.51693	1
CGGTAAT	7310	88.23221	1
CGGTGGT	40380	87.38004	7
CGGGTAA	5355	86.349754	1