FastQCFastQC Report
Wed 11 May 2022
EGAF00005416814

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005416814
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23267187
Sequences flagged as poor quality0
Sequence length125
%GC29

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC312620.1343608920150081No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT272250.11701027717703906No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT254380.10932993318014765No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)