FastQCFastQC Report
Thu 12 May 2022
EGAF00005416822

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005416822
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26057956
Sequences flagged as poor quality0
Sequence length125
%GC32

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC879690.33758979407287354No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT677220.2598899161545902No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA477360.18319165171665805No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA421670.16182005986962292No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT381820.14652722569644372No Hit
CGGGGACGCGGAAGTTTGTTTGAGGGAGGAGGGGTGGAAGGAGAGATAGT288450.11069555877675133No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)