EGAF00005416894 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005416894
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21782262
Sequences flagged as poor quality	0
Sequence length	125
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	56046	0.25730110123549155	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	45820	0.21035464544499555	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	39659	0.18207016332830814	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	36563	0.16785676345275805	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	34611	0.1588953433761838	No Hit
TGGGTGGAGTGGAATGGAATGTAATGGAGTGGAATGTAATGGAATTTAGT	31404	0.14417235455160718	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	29865	0.13710697263672617	No Hit
TGGAATAGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	27856	0.12788387174848967	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	26043	0.11956058558105674	No Hit
TGGAATGGAATGGAATGGAATGGAATGTAAAGTAATGGAATTAATTTGAT	24728	0.11352356334709407	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	22046	0.10121079252466984	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGCTAA	1020	112.51622	1
CGGGTGC	12765	112.36047	1
CGGTTAA	93220	111.43397	1
CGGGCGC	30095	108.714	1
CGGGTAC	12000	105.803535	1
CGGGCAT	470	103.55453	1
CGGGTGT	38610	95.865616	1
CGGATGC	1410	95.031525	1
CGGAATA	25535	94.64292	1
GGGCGCG	37425	93.4518	2
GGGAGGC	50090	92.557724	2
CGGGAGG	124090	92.24443	1
CGGTAAT	15830	92.04766	1
CGGGTAT	39735	90.26312	1
CGGAAAT	12610	89.82107	1
CGGGTTT	86850	89.00654	1
CGGAGTG	13540	88.71072	1
CGGTACA	95	88.54955	1
CGGGTAA	11305	88.12434	1
CGGGCGT	50555	87.75072	1