FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005418427

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005418427
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23639768
Sequences flagged as poor quality0
Sequence length125
%GC32

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC516210.2183650871700602No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA402080.17008627157423878No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT389910.16493816690586813No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA313680.1326916575492619No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)