FastQCFastQC Report
Thu 12 May 2022
EGAF00005418618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005418618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28355841
Sequences flagged as poor quality0
Sequence length125
%GC29

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT558460.19694707697084352No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC426160.15029002313844264No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA422770.14909450225792986No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT303220.1069338765159531No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA289970.10226111791217903No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)