EGAF00005418638 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005418638
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17164776
Sequences flagged as poor quality	0
Sequence length	125
%GC	33

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	58549	0.34109970325275435	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	36694	0.21377500061754373	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	28006	0.16315971731876955	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	26264	0.15301102676784128	No Hit
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAG	24122	0.14053198247387558	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	22971	0.13382638957828522	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATTTTGTTAGTT	21920	0.1277033851184542	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	20069	0.11691967317254824	No Hit
TGGGTTTTGTTATTTTAATAAATTTTGTTTTTGGGTGGGTGTGGGTATAA	18416	0.10728948632944584	No Hit
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTCGAGTAGTTGGGATTATA	17404	0.101393691359561	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGCGC	27875	115.170555	1
CGGTTAA	125975	114.23065	1
CGGGTGC	8480	113.68694	1
CGGGTAC	11095	110.37036	1
CGGCTAA	900	109.69556	1
GGGCGCG	32865	103.51778	2
GGCGCGG	34385	96.38216	3
CGGAATA	18855	96.01555	1
CGCGGTG	34780	95.5091	5
CGGATAC	1420	95.07382	1
GCGCGGT	34385	94.28923	4
CGGGTAT	34500	93.1579	1
CGGGTGT	29375	92.72803	1
CGGGTTT	89260	92.02867	1
CGGATGC	1250	91.35129	1
CGGAAAT	9360	91.30707	1
CGGATAA	9150	91.19269	1
CGGGCGT	43095	90.40743	1
CGGTAAT	11380	90.046425	1
CGGAATT	22195	89.09635	1