EGAF00005418644 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005418644
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16960290
Sequences flagged as poor quality	0
Sequence length	125
%GC	33

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	60230	0.35512364470182994	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	34202	0.20165928766548213	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	30245	0.17832831867851318	No Hit
TGGAATAGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	28056	0.16542169974687934	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	27227	0.16053381162704175	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	24151	0.14239732929094961	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	24025	0.1416544174657391	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	22307	0.1315248736902494	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATTTTGTTAGTT	19515	0.11506289102367942	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	18374	0.10833541171760624	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGCGC	29090	114.989006	1
CGGTTAA	117550	114.41218	1
CGGGTGC	8525	113.22515	1
CGGCTAA	935	109.47205	1
CGGGTAC	10740	108.269646	1
GGGCGCG	34735	102.75188	2
CGGAATA	20855	96.79035	1
GGCGCGG	36235	95.60903	3
CGCGGTG	36085	95.150604	5
CGGATAC	1535	93.044205	1
GCGCGGT	36435	93.01092	4
CGGGTAT	29675	92.92911	1
CGGGTGT	27540	92.07337	1
CGGGCGT	40140	91.41398	1
CGGATGC	1150	91.07544	1
CGGGTTT	73975	89.37489	1
CGGTAAT	10420	89.150055	1
CGGATAA	8470	89.08863	1
CGGTGGT	63470	88.94819	7
CGGGTAA	7875	88.11187	1