Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005418728 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 28895700 |
Sequences flagged as poor quality | 0 |
Sequence length | 125 |
%GC | 34 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC | 90864 | 0.314455091934094 | No Hit |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTATCTCGTATGC | 61615 | 0.21323241866436876 | TruSeq Adapter, Index 2 (100% over 50bp) |
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT | 56786 | 0.19652058956869017 | No Hit |
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATTTTGTTAGTT | 33039 | 0.11433881165709776 | No Hit |
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTCGAGTAGTTGGGATTATA | 29902 | 0.10348252508158653 | No Hit |