FastQCFastQC Report
Thu 12 May 2022
EGAF00005418873

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005418873
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27918978
Sequences flagged as poor quality0
Sequence length125
%GC31

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGAATAGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA982700.35198279822420436No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT832490.29818068555374766No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA617990.22135122567881962No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC503430.18031820505750604No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATTAATTTGATTGTAATGGAA446890.16006674742893526No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT430590.15422842483704097No Hit
TGGAATGGAATGGAATGGAATGGAATGTAAAGTAATGGAATTAATTTGAT419770.1503529248097835No Hit
TGGAATAGAATGGAATGTAATGGAATGGAATGGAATGGAATGGAATGGAA298030.10674817681363552No Hit
TGGAATGGAATGGAATGGAATGGAATTAATTTTATTGTAATGGAATGGAA291540.10442359315588129No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)