EGAF00005418881 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005418881
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20941970
Sequences flagged as poor quality	0
Sequence length	125
%GC	34

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	70557	0.3369167275093986	No Hit
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAG	56013	0.26746767376708114	No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	48291	0.2305943519162715	No Hit
TGGAATAGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	48127	0.2298112355236876	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	44493	0.2124585222880178	No Hit
TGGGTTTTGTTATTTTAATAAATTTTGTTTTTGGGTGGGTGTGGGTATAA	41595	0.19862028261906592	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	39635	0.1892610867076975	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	35848	0.17117778317894639	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATTTTGTTAGTT	23853	0.11390045922136266	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	23543	0.11242017823538092	No Hit
TGGAATGGAATGGAATGGAATGGAATGTAAAGTAATGGAATTAATTTGAT	21727	0.1037485967175008	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGTTAA	140815	114.66561	1
CGGGCGC	24445	113.36644	1
CGGGTGC	8400	112.567474	1
CGGCTAA	895	111.700356	1
CGGGTAC	10275	105.8675	1
GGGCGCG	30325	96.928	2
CGGAATA	19280	95.77299	1
CGGGTAT	33195	91.22798	1
CGCGGTG	31240	91.20724	5
GGCGCGG	31200	91.14052	3
CGGATAC	1620	90.72986	1
CGGGTGT	29625	89.90835	1
CGGGTTT	94320	89.46244	1
CGGTAAT	10875	88.42609	1
GCGCGGT	31645	87.93506	4
CGGGCGT	41115	87.780655	1
CGGATGC	1125	86.74803	1
CGGAATC	1710	86.6506	1
CGGGTAA	8940	86.39836	1
CGGAATT	21880	86.02411	1