FastQCFastQC Report
Thu 16 Jun 2022
EGAF00005418921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005418921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28439583
Sequences flagged as poor quality0
Sequence length125
%GC32

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC909870.31993085130678606No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT384040.13503714171899073No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT367390.1291826254977086No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)