EGAF00005418969 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005418969
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21467515
Sequences flagged as poor quality	0
Sequence length	125
%GC	34

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	80274	0.3739324276703661	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	43128	0.20089889304840358	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	34560	0.1609874268167508	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	26456	0.1232373658525451	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATTTTGTTAGTT	26101	0.12158370449490777	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	23108	0.10764170887967238	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	22332	0.10402694489790737	No Hit
TGGAATAGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	22265	0.10371484543040962	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	21507	0.10018392906677835	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGCGC	39095	114.73862	1
CGGTTAA	146260	113.58311	1
CGGGTGC	11630	112.42576	1
CGGCTAA	1090	110.441864	1
CGGGTAC	14945	108.98145	1
GGGCGCG	45930	102.53089	2
GGCGCGG	47105	96.72578	3
CGCGGTG	47710	94.93775	5
CGGAATA	22910	94.81593	1
GCGCGGT	47440	93.98487	4
CGGGTAT	44205	92.4425	1
CGGGTGT	37900	91.93964	1
CGGGCGT	57195	91.82789	1
CGGATGC	1570	91.480034	1
CGGAAAT	12855	90.40063	1
CGGTAAT	14200	89.97986	1
CGGGTTT	110410	89.86459	1
CGGATAC	2190	89.80048	1
CGGTGGT	84180	88.33027	7
GCGGTGG	67840	88.29484	6