EGAF00005418982 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005418982
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18607263
Sequences flagged as poor quality	0
Sequence length	125
%GC	31

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	43565	0.2341290065067603	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	38471	0.20675259977783944	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	38284	0.20574761586376247	No Hit
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	30311	0.16289875625447978	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	28037	0.15067772191966117	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	27450	0.14752303979365478	No Hit
CGGAATGGAATGGAATGGAATGGAATGTAAAGTAATGGAATTAATTCGAT	24978	0.1342379048439311	No Hit
CGGGAGGCGGAGTTTGTAGTGAGTCGAGATCGCGTTATTGTATTTTAGTT	23657	0.12713852649903426	No Hit
CGGGAGGCGGAGTTTGTAGTGAGTCGAGATTTCGTTATTGTATTTTAGTT	20150	0.1082910474259433	No Hit
CGGAACGGAATGGAATGGAATGGAATGGAATTAATTCGATTGTAATGGAA	19351	0.10399702524761434	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGCTAA	690	111.27272	1
CGGGTGC	8405	107.84754	1
CGGTTAA	64320	105.27611	1
GGGAGGC	65695	99.09412	2
CGGGTAC	8660	98.83006	1
CGGGAGG	146610	97.617424	1
CGGGCGC	19300	96.77066	1
CGGAATA	27650	93.95874	1
CGGGTGT	30575	90.61525	1
GCGGAGT	42740	90.48665	7
CGGTAAT	12875	90.46731	1
CGGGAAG	20195	89.74113	1
CGGATGC	910	89.60397	1
CGGGTAA	10860	88.07124	1
CGGGTTT	69325	87.63071	1
CGGGTAT	31865	87.357765	1
CGGATGA	6225	85.38079	1
GGAGGCG	76455	84.624725	3
GGCGGAG	75590	84.561295	6
CGGGATA	9840	83.04691	1