EGAF00005419067 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005419067
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	21645277
Sequences flagged as poor quality	0
Sequence length	125
%GC	32

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	78048	0.36057750612292927	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	49453	0.2284701646460796	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	40066	0.18510273626897916	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	35638	0.1646456176097908	No Hit
TGGATGTTAGAGGGGTGTTTTGGGTAATTTTTGGGATTTAGAAGTGAAAG	28201	0.1302870829511676	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATTAAT	27766	0.12827740666012266	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	24974	0.11537851883346192	No Hit
TGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	23676	0.10938182957880371	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	22292	0.10298782501143322	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGTGC	12985	112.108604	1
CGGGCGC	40255	111.01559	1
CGGTTAA	91710	109.13867	1
CGGGTAC	16175	104.80964	1
CGGCTAA	725	103.617966	1
GGGCGCG	47615	98.0168	2
CGGGTAT	48310	96.313286	1
CGGGTGT	42470	95.754616	1
CGGTAAT	16490	93.69617	1
CGGAATA	26495	93.5001	1
GGGAGGC	61235	92.917496	2
CGGGAGG	145700	92.06111	1
CGGGCGT	61375	91.49161	1
CGCGGTG	48215	91.405975	5
GGCGCGG	49090	91.14373	3
CGGGTAA	12430	90.79806	1
GCGCGGT	48475	90.38427	4
CGGGTTT	88930	89.17695	1
CGGATAC	2015	86.306114	1
CGGAATG	103830	86.24693	1