EGAF00005419080 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005419080
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19441011
Sequences flagged as poor quality	0
Sequence length	125
%GC	34

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGGGCGCGGTGGTTTACGTTTGTAATTTTAGTATTTTGGGAGGTCGAGGC	59953	0.3083841678809811	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATCGTGTTAGTT	42250	0.2173240887523802	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGAAATGTAATGGATTTAAT	27545	0.1416850183357234	No Hit
CGGTTAATTTTTTGTATTTTTAGTAGAGACGGGGTTTTATTTTGTTAGTT	24620	0.12663950449902014	No Hit
CGGGTTTACGTTATTTTTTTGTTTTAGTTTTTCGAGTAGTTGGGATTATA	24467	0.12585250839063875	No Hit
CGGAATAGAATGGAATGGAATGGAATGGAACGGAATGGAATGGAATGGAA	21813	0.11220095498119928	No Hit
TGGAGTAGTAAGTTATAATATGGGAGATTATTTTGAAGTTTGGTAGGATA	20936	0.10768987271289544	No Hit
CGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAATGGAA	20205	0.1039297801950732	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGGGCGC	28300	114.205315	1
CGGTTAA	144320	113.39583	1
CGGGTGC	9265	112.877266	1
CGGGTAC	11795	105.81337	1
CGGCTAA	905	105.17304	1
GGGCGCG	33940	100.38898	2
CGGAATA	21320	94.590065	1
GGCGCGG	35570	93.14905	3
CGCGGTG	35585	92.801544	5
CGGGTTT	108670	91.87407	1
GCGCGGT	35565	91.54946	4
CGGGTAT	37615	91.39546	1
CGGGTGT	33295	90.94353	1
CGGAATT	25290	89.8561	1
CGGGCGT	47135	88.54807	1
CGGTAAT	12260	88.31083	1
CGGAGTG	12350	88.19712	1
CGGGTAA	9755	87.44901	1
CGGATAA	9520	87.17065	1
CGGATAC	1730	85.96604	1