FastQCFastQC Report
Thu 2 May 2024
EGAF00005419917

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005419917
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37725764
Total Bases2.8 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCTTAGGACACCTGCGTTACCGTTTGACAGGTGTACCGCCCCAGTCAA690490.18302876516960664No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG636810.16879976241170358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)