EGAF00005419947 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005419947
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	28583520
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	71066	0.2486257815692399	No Hit
TCCTAGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATC	56821	0.1987893723376267	No Hit
TCCTGGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATC	55371	0.19371651916908766	No Hit
TCCTTGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATC	49055	0.17161987047081675	No Hit
TCCTCGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATC	31717	0.11096254065279573	No Hit
GCTGCTGTCTTCCTAGATTCACTGAATCCACTTCTGTGTAGCACCTGGGT	30997	0.10844360666565908	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCTCGC	109055	38.89848	70
ATCGCAC	126165	35.331497	20
AATCGCA	126830	35.167767	19
AAATCGC	127675	35.128674	18
TTGCTCG	122030	35.0631	69
TCGCACT	127275	35.05673	21
ACCACGA	115955	34.88131	54
ACGAACT	121790	34.53605	57
CACGAAC	119055	34.008472	56
CCACGAA	118915	33.966724	55
CGCACTG	131255	33.932617	22
CGAACTG	125300	33.834713	58
GACTCTT	129205	33.31641	36
TCCTATC	131055	33.22261	44
TGGACTC	131130	33.21499	34
GGACTCT	130440	33.15834	35
CCTGGAC	131245	33.10663	32
CACCACG	125015	32.92333	53
TTCCTAT	132300	32.88294	43
CTGGACT	132705	32.79486	33