FastQCFastQC Report
Thu 2 May 2024
EGAF00005420030

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005420030
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40543085
Total Bases3 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG534770.1319016547458093No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG471010.1161751751254252No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)