FastQCFastQC Report
Wed 1 May 2024
EGAF00005420079

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005420079
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29334611
Total Bases2.2 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCCTTAGGACACCTGCGTTACCGTTTGACAGGTGTACCGCCCCAGTCAA718470.24492228650995237No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG469880.16017938673193927No Hit
TCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCG389330.13272035548724337No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)