FastQCFastQC Report
Sat 11 May 2024
EGAF00005420100

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005420100
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25616735
Total Bases1.9 Gbp
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG626720.24465256794044984No Hit
TTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG432620.16888178762828285No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG349490.13643034524110897No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)