EGAF00005420150 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005420150
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34763620
Sequences flagged as poor quality	0
Sequence length	75
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGCCTTAGGACACCTGCGTTACCGTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTCCCCGG	95122	0.27362512879843925	No Hit
GCTACGTACGAAACCCCGACCCAGAAGCAGGTCGTCTACGAATGGTTTAGCGCCAGGTTCCCCACGAACGTGCGG	59735	0.1718319323476669	No Hit
GGTCGTCTACGAATGGTTTAGCGCCAGGTTCCCCACGAACGTGCGGTGCGTGACGGGCGAGGGGGCGGCCGCCTT	57194	0.16452256698237985	No Hit
GCTCTGCTACGTACGAAACCCCGACCCAGAAGCAGGTCGTCTACGAATGGTTTAGCGCCAGGTTCCCCACGAACG	52423	0.15079844964362168	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	49245	0.14165670893882742	No Hit
TCCTCTAGATAGTCAAGTTCGACCGTCTTCTCAGCGCTCCGCCAGGGCCGTGGGCCGACCCCGGCGGGGCCGATC	45377	0.13053013466376634	No Hit
GTATTCGTACTGAAAATCAAGATCAAGCGAGCTTTTGCCCTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGC	44384	0.12767370026481709	No Hit
CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGT	44130	0.12694305138532752	No Hit
ACGAATGGTTTAGCGCCAGGTTCCCCACGAACGTGCGGTGCGTGACGGGCGAGGGGGCGGCCGCCTTTCCGGCCG	39812	0.11452202043400544	No Hit
GGGGGTGGGGGGGGCGCGCCGGCGCCCGCCGGGCTCCCCGGGGGCGGCCGCGACGCCCGCCGCAGCTGGGGCGAT	37143	0.10684445405858194	No Hit
CCCTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACG	36613	0.10531987175098566	No Hit
GTCGTCTACGAATGGTTTAGCGCCAGGTTCCCCACGAACGTGCGGTGCGTGACGGGCGAGGGGGCGGCCGCCTTT	36431	0.10479633593969788	No Hit
TTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACACCCGCCGCGGGCCTTCGCGATGCTTTGTTTTAA	35252	0.1014048594478941	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGTACGA	4285	39.211876	5
TGCGTAC	8915	36.156017	3
CTGCGTA	8510	35.65758	2
ATGTACG	4335	35.578674	4
GCCTACG	2780	35.53255	1
CGGACTA	2565	34.9724	5
GCGTACG	9885	32.35746	4
GCTTACG	2640	31.79124	1
CGTCGTT	3075	30.97555	3
GTTACGT	2455	30.810432	1
GCTTCGT	4670	30.322996	1
ACGAGTG	2655	29.920473	1
GTGCGAA	2275	29.732384	3
GTTCGTA	2580	28.625238	3
ACCGTCC	21785	28.441917	10
TTACCCG	9430	27.950722	9
TACCCGC	9495	27.650295	10
AGCTACG	2845	27.55807	1
TATCGAT	7790	27.458185	7
TTATCGA	7735	27.430733	6