EGAF00005420232 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005420232
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	34729861
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TCCTAGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATC	94408	0.27183523711770685	No Hit
TCCTGGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATC	90872	0.26165379700195174	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	89726	0.2583540429372867	No Hit
TCCTTGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATC	78079	0.22481806074605365	No Hit
GCTGCTGTCTTCCTAGATTCACTGAATCCACTTCTGTGTAGCACCTGGGT	53662	0.15451256772953972	No Hit
TCCTCGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATC	50925	0.14663174148609465	No Hit
TCCTGCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATCT	46349	0.13345576015982327	No Hit
TCCTATCTTCCTTCACCAAATCGCACTGGCTCCTGGACTCTTTTCCTATC	35125	0.1011377500186367	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TGCTCGC	156060	39.42005	70
ATCGCAC	177535	36.11791	20
AAATCGC	179645	35.819153	18
TCGCACT	179200	35.798107	21
AATCGCA	179465	35.752586	19
TTGCTCG	173570	35.70553	69
ACCACGA	167785	35.360138	54
CGCGAAC	2865	35.289326	5
CGCACTG	182980	35.007042	22
ACGAACT	175720	34.999058	57
CACGAAC	171390	34.620075	56
CCACGAA	172255	34.4367	55
GACTCTT	181060	34.427605	36
GGACTCT	182270	34.38705	35
CGAACTG	179535	34.287003	58
CCTGGAC	184160	34.1676	32
TCCTATC	186800	33.627594	44
CACCACG	179575	33.498	53
TTCCTAT	187480	33.49571	43
TGGACTC	189145	33.381165	34