FastQCFastQC Report
Wed 1 May 2024
EGAF00005420395

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005420395
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36187307
Total Bases2.7 Gbp
Sequences flagged as poor quality0
Sequence length76
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG698210.19294334336622507No Hit
TTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG501590.13860937482858285No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)