FastQCFastQC Report
Wed 11 May 2022
EGAF00005422142

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005422142
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44226805
Sequences flagged as poor quality0
Sequence length35-75
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGAGTCTTGGAAGCTTGACTACCCTACGTTCTCCTACAAATGGACCTTGAGAGCTTGTTTGGAGGTTCTAGC514200.11626433336072999No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)