FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005431776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58972988
Sequences flagged as poor quality0
Sequence length125
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA615450.07.5916996118-119
ATCGGAA602050.07.2719264118-119
AGATCGG686450.07.1182327118-119
TAGATCG227250.06.8926463118-119
ACACGTC339400.06.839407118-119
CGTCTGA284550.06.5283093118-119
TCGGAAG660750.06.1580834118-119
ACGTCTG341400.05.9374523118-119
CGGAAGA681600.05.804004118-119
CACGTCT377600.05.635862118-119
CACACGT429050.05.604281118-119
GCACACG482350.05.2191577118-119
CAGATCG281250.05.0725694118-119
Produced by FastQC (version 0.11.5)