FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005431777

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431777
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58972988
Sequences flagged as poor quality0
Sequence length125
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG334100.07.763242118-119
GCGTCGT297050.07.730202118-119
GATCGGA611700.07.6196256118-119
GTCGTGT293950.07.5688734118-119
CGTCGTG296850.07.5350113118-119
TCGTGTA262000.07.4133587118-119
ATCGGAA598600.07.2894793118-119
AGATCGG682600.07.094001118-119
CGTGTAG280250.06.8350763118-119
TAGATCG214200.06.6792655118-119
AGAGCGT449450.06.624541118-119
AAGAGCG515450.06.4514647118-119
GAGCGTC442700.06.2888236118-119
TCGGAAG662350.06.107373118-119
CGGAAGA686850.05.811573118-119
Produced by FastQC (version 0.11.5)