FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005431794

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431794
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102613993
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT63750.08.48861242
TCGTATG65900.08.3685843
CGTATGC73950.07.50420944
TATGCCG83100.06.98607846
GATCGGA102550.05.82286741
AATCTCG115100.05.21063139
ATCGGAA120200.05.13330842
TCTCGTA115800.05.060074341
Produced by FastQC (version 0.11.5)