FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005431807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104986704
Sequences flagged as poor quality0
Sequence length75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTATGC69350.07.50483744
TCGTATG68950.07.398407543
CTCGTAT69700.07.21989542
TATGCCG76050.06.770519746
GATCGGA102700.05.51181171
Produced by FastQC (version 0.11.5)