FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005431811

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431811
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67963901
Sequences flagged as poor quality0
Sequence length75
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT41400.06.415614642
TCGTATG43650.06.400790743
TATGCCG47250.05.996001746
ACGAAAC57100.05.858926332
CGTATGC48150.05.739523444
Produced by FastQC (version 0.11.5)