FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005431866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49142197
Sequences flagged as poor quality0
Sequence length125
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA549300.07.5155554118-119
AGATCGG607600.07.327612118-119
TAGATCG199900.07.121822118-119
ATCGGAA534850.07.0239835118-119
TCGGAAG583000.06.352108118-119
CGGAAGA602350.06.291145118-119
ACACGTC296950.06.2255177118-119
CGTCTGA250250.06.18774118-119
ACGTCTG292550.05.7705426118-119
CACGTCT331850.05.526011118-119
CACACGT374600.05.4904346118-119
GCACACG413500.05.433938118-119
AAGATCG250500.05.1967854118-119
Produced by FastQC (version 0.11.5)