FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005431896

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431896
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences84049706
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG52900.07.82554143
CTCGTAT54800.07.42826542
CGTATGC57550.07.2533644
TATGCCG58050.07.24958846
GATCGGA79100.05.89758351
ATCGGAA93750.05.2984212
Produced by FastQC (version 0.11.5)