FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005431912

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431912
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences77968096
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG52800.09.341928543
CGTATGC57900.08.4721744
CTCGTAT50900.08.26772342
TATGCCG62750.08.09375746
GATCGGA83300.06.1354781
TCACGAT97750.05.64592535
TCTCGTA86800.05.404583541
ATCGGAA97100.05.39954042
Produced by FastQC (version 0.11.5)