FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005431942

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431942
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences104806056
Sequences flagged as poor quality0
Sequence length75
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT68900.09.80233442
TCGTATG70200.09.47355343
CGTATGC72550.08.69173644
TATGCCG76150.08.4822846
TATCTCG80250.08.07246839
GATCGGA99750.06.95173651
TCTCGTA116950.05.83389341
ATCGGAA122200.05.640642
Produced by FastQC (version 0.11.5)