FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005431982

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005431982
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74116082
Sequences flagged as poor quality0
Sequence length75
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGTAT45550.08.2542442
TCGTATG51100.07.69497843
CGTATGC51450.07.52042144
TATCTCG52500.07.29285139
TATGCCG54700.07.20101446
GATCGGA69450.05.91707321
TCTCGTA82050.05.50720741
ATCGGAA82300.05.11314542
CGATGTA79850.05.053880734
Produced by FastQC (version 0.11.5)